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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs35139281 chr16:20770247 TG/T 3.4E-5 489 16.37 14.67 17.65 KM Plot
THCA rs35139465 chr1:22376452 C/T 1.47E-7 484 15.25 17.93 6.57 KM Plot
THCA rs35151185 chr1:22456756 C/CT 2.68E-7 477 15.48 18.47 6.72 KM Plot
THCA rs35157502 chr7:30099194 AT/A 4.78E-5 472 15 16.37 17.73 KM Plot
THCA rs35158836 chr16:20900406 C/T 0.000102 489 16.27 14.8 17.65 KM Plot
THCA rs35159404 chr10:104805610 C/A 5.23E-9 488 15.23 17.68 32.1 KM Plot
THCA rs35204876 chr6:99474459 T/TC 1.79E-5 489 15.32 19.17 25.13 KM Plot
THCA rs35206652 chr6:24489345 T/C 3.0E-9 484 16.37 15.63 12.67 KM Plot
THCA rs35207574 chr8:52527363 TAA/T 0 490 16.23 14.33 10.4 KM Plot
THCA rs35209919 chr16:20869146 T/TA 0.000107 476 16.63 14.75 17.65 KM Plot
THCA rs35254761 chr6:134817909 C/A 2.78E-6 484 16.27 12.67 34.1 KM Plot
THCA rs35261711 chr6:99312056 TACC/T 2.19E-5 487 15.67 18.77 25.13 KM Plot
THCA rs35278072 chr18:21168956 G/C 1.59E-6 484 15.63 16.92 14.3 KM Plot
THCA rs35280137 chr3:14575083 G/C 1.37E-6 483 16.67 15.07 14.52 KM Plot
THCA rs35308165 chr18:21170602 C/CA 4.43E-7 470 15.48 16.97 14 KM Plot